Plant Soil Environ., 2007, 53(7):325-328 | DOI: 10.17221/2206-PSE
Chromosomal rearrangements in Arabidopsis mutants revealed by repeated FISH
- Institute of Biophysics, Academy of Sciences of the Czech Republic, Brno, Czech Republic
The stability of plant nuclear genome is a necessary condition for the faithful transmission of genetic information through cell lineages. When DNA damage occurs due to various impairments, cells start a number of repair processes including ligation of broken chromosomes. As a result, dicentric chromosomes can be formed. Dicentrics are easily detectable as anaphase bridges during following mitosis. Using Arabidopsis as a model plant, we developed a sensitive cytogenetic assay to identify specific chromosomal rearrangements. Here we show Arabidopsis tert-/- and atm-/- mutants and their chromosome rearrangements and fusions analysed by fluorescence in situ hybridization (FISH). The method is based on successive rounds of FISH with chromosome-specific probes and the comparison of resulting FISH images.
Keywords: Arabidopsis; FISH; chromosomal fusions; BAC probes; rDNA loci
Published: July 31, 2007 Show citation
References
- Ferreira M.G., Miller K.M., Cooper J.P. (2004): Indecent exposure: When telomeres become uncapped. Mol. Cell, 13: 7-18.
Go to original source...
Go to PubMed...
- Fitzgerald M.S., Riha K., Gao F., Ren S.X., McKnight T.D., Shippen D.E. (1999): Disruption of the telomerase catalytic subunit gene from Arabidopsis inactivates telomerase and leads to a slow loss of telomeric DNA. Proc. Natl. Acad. Sci. USA, 96: 14813-14818.
Go to original source...
Go to PubMed...
- Kiss T., Kis M., Solymosy F. (1989): Nucleotide sequence of a 25S rRNA gene from tomato. Nucleic Acids Res., 17: 796.
Go to original source...
Go to PubMed...
- Koornneef M., Fransz P., de Jong H. (2003): Cytogenetic tools for Arabidopsis thaliana. Chromosome Res., 11: 183-194.
Go to original source...
Go to PubMed...
- Lysak M.A., Fransz P.F., Ali H.B.M., Schubert I. (2001): Chromosome painting in Arabidopsis thaliana. Plant J., 28: 689-697.
Go to original source...
Go to PubMed...
- Rhee S.Y., Beavis W., Berardini T.Z., Chen G., Dixon D., Doyle A., Garcia-Hernandez M., Huala E. et al. (2003): The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community. Nucleic Acids Res., 31: 224-228.
Go to original source...
Go to PubMed...
- Riha K., McKnight T.D., Griffing L.R., Shippen D.E. (2001): Living with genome instability: plant responses to telomere dysfunction. Science, 291: 1797-1800.
Go to original source...
Go to PubMed...
- Siroky J., Zluvova J., Riha K., Shippen D.E., Vyskot B. (2003): Rearrangements of ribosomal DNA clusters in late generation telomerase-deficient Arabidopsis. Chromosoma, 112: 116-123.
Go to original source...
Go to PubMed...
- Watson J.M., Bulankova P., Riha K., Shippen D.E., Vyskot B. (2005): Telomerase-independent cell survival in Arabidopsis thaliana. Plant J., 43: 662-674.
Go to original source...
Go to PubMed...
This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International (CC BY NC 4.0), which permits non-comercial use, distribution, and reproduction in any medium, provided the original publication is properly cited. No use, distribution or reproduction is permitted which does not comply with these terms.